November 2007


Life16 Nov 2007 09:26 am

… that’s a fully armed battle pigeon!

11-16-2007 8-45-23 AM.jpg

Today and yesterday have been frosty, clear mornings with a beautiful red-gold sunrise over the allotments. For breakfast we sit at our table in the window and look outside. There is a large tree behind our neighbours’ house, in which large birds roost. Yesterday there was only one, facing away, and it was difficult to identify. Colin thought it might be a hawk, so we pulled out the theatre binoculars to get a (very slightly) closer look. I’m pretty sure yesterday’s bird was a pigeon (actually a rock dove, but they’re all flying rats, right?), given its suspiciously rotund body and tiny head. This morning there were three (though I can only spot one in the photo), and they really do look like little Death Stars with heads up there.

Travel05 Nov 2007 02:49 am

New York is just like Vancouver. Or at least you could be fooled for about 10 minutes after you (finally) step out of the terminal at JFK, jet-lagged and blurry, trying to get the hell out. And if it was Vancouver in about another 2 years, when the airport finally has a rapid transit link to downtown.

I have to admit, I met the first set of criteria quite nicely a few days ago, when I first encountered the JFK AirTrain. There was something oddly familiar about the elevated tracks as I looked up from underneath, on the arrivals level. I shrugged it off and focused on hauling my mauled suitcase up to the next level - after all, I’ve been in a lot of airports, and been on a lot of rapid transit systems. They all start to look alike after a while.

Imagine my surprise when I hear the train approaching the station, and in my head chimes the voice of SkyTrain: “The next station is … Patterson”. The cars are a little wider and differently configured inside, but it’s the same sound. I spent the next few minutes in a happy daze, poking around looking for a Bombardier logo. Didn’t find it, but all-knowing Wikipedia confirmed my suspicions: it’s the same technology. Apparently it’s also in Detroit, Toronto (Scarborough line), and Kuala Lumpur. Guess which one I’d like to visit for my next magnetic induction fix?

Conferences04 Nov 2007 03:29 pm

Conferences are funny things.  They’re a forum for presenting research as positively as possible, and for talking more candidly at the bar afterwards.  Also, they are an opportunity to explore someone else’s campus and work environment.  I did a little of the second yesterday.

An important part of Genome Informatics is the so-called "Birds of a Feather" sessions.  These are short meetings of special interest groups within the conference participants.  I attended the "regulatory elements" session.  I’m interested in the internal logic and output of regulatory modules; not so much finding them in genomes but figuring out how they work.  It was a big group, perhaps three or four dozen people.

As usual, we began by going around the room introducing ourselves.  I thought this would take perhaps 10 or 15 minutes.  You know the form: "Hi, I’m <name>.  I work at <institute>.  I’m interested in <topic>."  I was wrong.  The chair felt it necessary to ask two or three follow-up questions for each attendee, sometimes more.  Almost 90 minutes later, I could hear Treebeard in my head: "I have told your names to the Entmoot, and we have agreed that you are interested in regulatory elements."

My head cold was picking up steam, so I scooted out for a few minutes.  We were in one of the lab buildings, so I wandered off down the hall in search of somewhere private with decent drainage facilities, i.e. a bathroom.  Not only did I find a rather nice one, I also found a print-out e-mail on the wall opposite its door: "Please do not flush your dead flies down the toilet.  Use the biohazardous waste disposal units in your lab."  I checked very carefully for mutant butt-biting flies before sitting down.

Conferences and Travel02 Nov 2007 04:19 pm

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